PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152030.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 170aa    MW: 19043.9 Da    PI: 4.7663
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152030.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.6e-18957355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y GVr +k +g+Wv+eIr+p   gk++r++lg+f t+e+Aa+a++ a+  l+g
  XP_019152030.1  9 YVGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETPEMAAAAYDVAAFHLRG 57
                    99***999.**********8...557***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MEGSTMGVYV GVRKRKWGKW VSEIREPGKK TRIWLGSFET PEMAAAAYDV AAFHLRGCKA  60
RLNFPELVEG FPKPASSQPE DVRLAAHQAA MGFKPPAEGV PGAGLRPVRI GLSPNQIQAI  120
NETPMDSPNK MWMELAATTL LLREPPLMIC EDMMELEDWE EIQDDSIWDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.15e-52ERF family protein