PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152210.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 113aa    MW: 12515.9 Da    PI: 10.3915
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.62.3e-1128681355
             AP2 13 grWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    g+++AeIrdp+ +g   r++lg f+ta eA ka++ a  +l+g
  XP_019152210.1 28 GKFAAEIRDPKRRG--SRVWLGMFDTAIEAVKAYDLASFRLRG 68
                    89*******96554..************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MDRAQKLESG AREEREKALQ RGSTAAVGKF AAEIRDPKRR GSRVWLGMFD TAIEAVKAYD  60
LASFRLRGFT RKESNPELSF GSREAQASDG DAGPHGRWGE ATAKKSSPEM ERN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.11e-18ERF family protein