PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152292.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 243aa    MW: 26024.6 Da    PI: 6.8309
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.82.6e-3362118259
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     +++rY+eClkNhA+ +GghavDGCgEfmp+ ge+gt +alkCaACgCHRnFHR+e+e 
  XP_019152292.1  62 TRYRYRECLKNHAVGIGGHAVDGCGEFMPA-GEDGTLDALKCAACGCHRNFHRKEEEG 118
                     5789*************************9.999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MDFDEEQEEE IGMHEMEAEG NYPPLGSSGM GGGEEVVGGR KNGVGGGGGG GGGGGGGGGG  60
TTRYRYRECL KNHAVGIGGH AVDGCGEFMP AGEDGTLDAL KCAACGCHRN FHRKEEEGDG  120
LGHFHHHPHL THYPSFRPSG YLHVAPHRPL ALPSTSRDDD VSNPSSSGGG GGEGGSGGSK  180
KRFRTKFSQE QKDKMLAFAE RLEWRIQKHD EEAVQEFCAT TNVRRQVFKV WMHNNKHTLG  240
KKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-69ZF-HD family protein