PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152414.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 296aa    MW: 32873.1 Da    PI: 4.4189
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.7e-102212611055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     rrRR++iN+++  L++l+P+      +K++ +++Le+Av+Y+k +q
  XP_019152414.1 221 RRRREKINERLRILQSLVPNG-----TKVDISTMLEEAVHYVKFMQ 261
                     9******************97.....8****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
METVGAAAFF DEEWESSLSK LFAVENPDFM FQLQGDDNGG AGFEAPSTFW QAVEAAEASN  60
NGGGSLDNHL NHLVQSDDES MKFFVVSQNE FDTSVPVFDP DEVIRDISDE VEVSEEQTTR  120
NGNPKKRTRS VSRDGQKNKR NNANSKTKKN PKNMTENSNG EEYDSNTIMS ANNAVQSSSC  180
YSSEDDSIAS QDLINPGSTT SNGKTRASRG AATDPQSLYA RRRREKINER LRILQSLVPN  240
GTKVDISTML EEAVHYVKFM QLQIKLLSSD DLWMYAPIAY NGMDIGLYEK MLLPSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1221226RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.12e-43bHLH family protein