PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152449.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family FAR1
Protein Properties Length: 208aa    MW: 23431.8 Da    PI: 9.9234
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.63.7e-2230117291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                      Yn YA++vGFsvrk +++++  +++i +++f C k g++++ ++    +  ++   rtgC a ++     dg w vtk  +eHnHel++
  XP_019152449.1  30 LYNGYAYRVGFSVRKGQQRYKASTKSIQMKRFFCAKAGYKQKPNSG--VKLYSKIDMRTGCGAFVQFDVGGDGMWTVTKHLKEHNHELCS 117
                     7****************************************99887..888999**********************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MVIICKLNVV IVDEDLVGVV VRNVDEAFEL YNGYAYRVGF SVRKGQQRYK ASTKSIQMKR  60
FFCAKAGYKQ KPNSGVKLYS KIDMRTGCGA FVQFDVGGDG MWTVTKHLKE HNHELCSFGK  120
SHLLRSHRRV GNNQLEYLKD MKSSGVALAD GMRFLKHQSG GSPLVGFTNR DAYNSMASVS  180
LKCLDGSDSN SLVEIFRRRQ SNEADFFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-20FAR1 family protein