PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152455.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 214aa MW: 25081.5 Da PI: 7.0634

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	51.6	3.2e-16	4	137	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpkkvkaeekewyfFskrdkkya..tgkrknra.......tksgyWka 85 p G rF+P d +++ ++L + v+g+++ +e+ i++ d++ + ePw+L +++k yf ++ +kk++ +g+r +r+ k g+W+ XP_019152455.1 4 PLGARFQPFDYDVL-KFLFNFVTGRSCVDDEAlIHQEDVFgEKEPWELV---PSGKKMAYFLTRLKKKAKsmKGSRVQRTvgrkmkgKKPGTWHG 94 88********99.99*****6666666987356*4...45677889998877766644688888866777766679* PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + k+v ++ ++ l+g k+++ + ++++ + +W+++e+ l XP_019152455.1 95 QDIGKAVADEhGRFLMGYKRSFLYK-NKSEAEQDGKWLLKEFYL 137 ****9844556999887.5666669******976 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MEIPLGARFQ PFDYDVLKFL FNFVTGRSCV DDEALIHQED VFGEKEPWEL VPSGKKMAYF 60 LTRLKKKAKS MKGSRVQRTV GRKMKGKKPG TWHGQDIGKA VADEHGRFLM GYKRSFLYKN 120 KSEAEQDGKW LLKEFYLSET MIRRVRAEFP IVEERADFVL CRIERKKKDD DEDDDNDEED 180 DEITLEQGGT NNNLSEAIVS VPVPWIHYWH RRIT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	64	70	LKKKAKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	9e-07	NAC family protein