PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152457.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 237aa    MW: 25588.2 Da    PI: 5.1825
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152457.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.2e-1959108255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      ++GVr++  +g+WvAeIr+p   + r +r++lg+f t  eAa+a++ a+++l+g
  XP_019152457.1  59 TFRGVRQRT-WGKWVAEIREP---N-RgARVWLGTFNTSLEAARAYDDAARRLYG 108
                     69****999.**********8...3.35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEESSGDSTI NVRVPIGKEG GAVTGKPANT APPVKKSNVG RSRKGCMRGK GGPENALCTF  60
RGVRQRTWGK WVAEIREPNR GARVWLGTFN TSLEAARAYD DAARRLYGPS AKLNLLDDTF  120
SSLSSSSPGS TGGAGFNIGD DHYLSSSPGS SATATSEMSE GKEWYAEECS VLDEASVFRD  180
RDGKYLLWET PAPSLLDEEQ NRGWPEFPKD NNGFHCADGT EINIDMGAGV RVPPWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.14e-40ERF family protein