PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152552.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 234aa MW: 26851.4 Da PI: 7.9288

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152552.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.2	3.3e-09	187	221	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 + +yp+++e+ LA+++gL+ +q+ +WF N+R ++ XP_019152552.1 187 NWPYPTEAEKVVLAASTGLDRKQINNWFINQRKRH 221 569*****************************885 PP
2	ELK	25	4.3e-09	141	162	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 E+K++L+r Y++y +sLkqEFs XP_019152552.1 141 EIKERLMREYGEYMSSLKQEFS 162 89*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MTTTVTSAAA TTTNSSSKYC LKHKISSHPL YPKLLQAYID FYKVGAPAEE MDGILNEKDV 60 SRGTTSFSSD PELDEFMETY CDVLVKYKCC VERPFVEANE FISNMQTQLH NLCSATTHNI 120 ISGGADKTMP ISSSSSIGDH EIKERLMREY GEYMSSLKQE FSQWKKNGKL SQHAREALLN 180 WWSAHYNWPY PTEAEKVVLA ASTGLDRKQI NNWFINQRKR HWKPSKNMHF NLLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G70510.1	3e-76	TALE family protein