PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152553.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 222aa    MW: 25172.2 Da    PI: 9.4407
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152553.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.45.9e-091567654
                    HHHHHHHHHHHHHHHHHHHCTSCCC......TTS-.STCHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPkas...kapskK.lsKaeiLekAveYIksL 54
                    + +Er+RR ++++   +L +l+P++    +a s+  +s  + L +Av YIk+L
  XP_019152553.1 15 KTVERNRRIHMKNLCGKLVSLIPPQHrqpAAASRElVSQQDQLDQAVTYIKEL 67
                    679*********************777*97777778***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MDHVIQTPSE KLDRKTVERN RRIHMKNLCG KLVSLIPPQH RQPAAASREL VSQQDQLDQA  60
VTYIKELKER VEKLKKKTRK LVPAGEEEEE EEKERCSGSA SASLKAPILQ VRELGSSLEV  120
KLISCCTTNF MMHQVIKIVE EEGGQVVSAI FSAIGDKVFY TLHAQVKVTR LGMNTLEVYE  180
RLKKLINSQL PARYCSTYPS NNSRMKQQQQ QATLPCPSLN IL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.18e-21bHLH family protein