PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152590.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 237aa    MW: 26502.3 Da    PI: 9.3582
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08142182954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_019152590.1 142 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 182
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MDIEFLKSAS EDQLEMMLMM QMEKLPPEFS SGAYSDDISG MQMMNFSPQL MEHSSSSSPA  60
GFMGMPSTIS FTASPPTHDQ VAGEFSGFPA SQAQKRSTSM AAMREMIFRI AAMQPIHIDP  120
ETVKPPKRRN VKISTDPQSV AARHRRERIS ERIRILQRLV PGGTKMDTAS MLDEAIHYVK  180
FLKKQVQSLE RAGASRPSGI GFPVPMNGNY FPMTTKGYHH HPPQNNVQHY ADPQLTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.13e-42bHLH family protein