PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152691.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 337aa    MW: 36667.7 Da    PI: 5.3998
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51.1e-20149198255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  XP_019152691.1 149 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 198
                     59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MAATMDLWSS IGVDFHSSEP FNGGGDLMEA LEPFISASPS PSPSPSSSSD LFYGSYGSFN  60
GCSTSTTHMF QNGYSGCGVG QSGFIGLNPL TPLQVRQIQT QIDLQAQQMM GSAPFQSQWP  120
PQQRRNLSFL APRPVPMKVA HAPPKPTKLY RGVRQRHWGK WVAEIRLPKN RTRLWLGTFD  180
TAEEAALAYD KAAYKLRGDS ARLNFPNLRH NGSLIGGDFG EYKPLHSNVD AKLQAICQSL  240
AENKSLDSKK SKPAPPQKPK EEAVEDDKPA EAGPENSGSD SGSSGSVPEI CGSDSGSDGS  300
SPVSDRTFPD FTDEESTWDM FSELQKYPSH EIDWASL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.14e-57ERF family protein