PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152708.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 346aa    MW: 37499.5 Da    PI: 10.2778
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.39.9e-31274331359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYeg+H h+
  XP_019152708.1 274 DDYSWRKYGQKPIKGSPHPRGYYKCSSIrGCPARKHVERALDDPTMLIVTYEGDHSHS 331
                     99***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MAVELMSGFR SESLGGKMEE NAVQEAATAG LQSVEKLIRL ISQSQQQNSS FSAAPPLPAF  60
SADYQAEADA AVTKFKKFIS LLDRSRTGHA RFRRGPVVNQ KREVVDPVVN QNSSSRIRVS  120
EEPEKKIYHP KPIQSLPPLP HHHHHQPAKT SSAANTIERK EPSTTISFAA MAAPSPAGSF  180
ISSLTGDTDS VQPSLSSGFQ ITNLSQVSSA GKPPLSTSSF KRKSSSIDDA AVKCSSAGGS  240
ASGRCHCPKK RKTRVKRVVR VPAISLKMAD IPPDDYSWRK YGQKPIKGSP HPRGYYKCSS  300
IRGCPARKHV ERALDDPTML IVTYEGDHSH SRSITEAPSA LILESC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-73WRKY family protein