PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152757.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 316aa    MW: 33969.9 Da    PI: 7.5811
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.13.3e-16102151255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      ykGVr++  +g+Wv+eIr+p   + r  r++lg++   ++Aa a++aa+++++g
  XP_019152757.1 102 TYKGVRQRT-WGKWVCEIREP---N-RgSRIWLGTYENSYDAAVAYDAAARYIFG 151
                     69****999.**********8...3.35***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MHPTHPSKLT RSLATLPSHH CTRLPLSLTA YKSTPLSSSH SISMHTLLFD RYIEMANGSG  60
SAAAGGGSGD QQPPSSRRHN PRAVSRKGCM RGKGGPENAS CTYKGVRQRT WGKWVCEIRE  120
PNRGSRIWLG TYENSYDAAV AYDAAARYIF GAKAKLNLPH LWENEPPPPS LGVGSSYPFP  180
RLNNPSQLLP SPETCADGSG GSTVPAAYGN CASSSTSSAH HQNASIFNGD NSSVISPAAP  240
PPLQNIKLPK LDMNEKAPEN EVEGMWGTFN LNGLPEIDDS SMWAEATATS DIQAAVTDPG  300
IFDGKMWTAV DYPWYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-33ERF family protein