PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152920.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 248aa    MW: 27226.6 Da    PI: 5.2522
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152920.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.14.2e-054291154
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +r+ + erE+  R+++N+ f  L   l  +     + + Ka+iL ++v+ +k+L
  XP_019152920.1 42 KRVHKAEREKLKREHLNDLFLSLANALELS----EQANGKATILNETVRRVKDL 91
                    79999**********************998....68899*********999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MTSPNMDSEG QATPVGGKGS TPSETPQNGS NATKKSQEKV PKRVHKAERE KLKREHLNDL  60
FLSLANALEL SEQANGKATI LNETVRRVKD LLAEIVHLKK ENAALLSESE YMSMETKELE  120
DENSVLEAEI SELQSKLVSQ IKEIKERTTG SNLDLNLAPP GCEQEVIAPD YFSLPANQPA  180
SQTAETMMNP VYVYPFRPEP RAYPAPALPA STVSKPLARY PTPTDAWSSQ ILGKRPRLEK  240
ETQGGGSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.23e-45bHLH family protein