PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152924.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 92aa    MW: 10331.6 Da    PI: 8.5255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152924.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12.1e-1020601454
                    HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    d+iN+  ++L++llP++ +++s K+s a +L+ +++YI+sL
  XP_019152924.1 20 DQINDLVSKLQQLLPELRNTSSDKVSAARVLQDTCNYIRSL 60
                    79**************88*********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSSRRSRSRN TGGASRISDD QINDLVSKLQ QLLPELRNTS SDKVSAARVL QDTCNYIRSL  60
HREVDDLSER LSELLATTDT NQAALIRSLL MQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.11e-39bHLH family protein