PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152947.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 224aa MW: 23448 Da PI: 7.1499

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152947.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.7	2.3e-37	21	79	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ek+l+cprCdstntkfCyynny+l qPr+fCk+CrryWt+GGalrnvPvGg++rk ++ XP_019152947.1 21 EKNLACPRCDSTNTKFCYYNNYNLCQPRHFCKSCRRYWTRGGALRNVPVGGATRKPPSK 79 7899***************************************************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MSSDGGERRP ARVRGVEAAA EKNLACPRCD STNTKFCYYN NYNLCQPRHF CKSCRRYWTR 60 GGALRNVPVG GATRKPPSKK RSRTVAVAAA AARSARSPAP VMVGISPGSG REVNLNKAVP 120 ESETESFAPV GGGGVEFSPL GEYGLGLEPS GLHDEFDFGL GLCDWPAEPV VGGNGGEAAN 180 VNGGVAATSW NDDDAWQIGG GLSDGGDDCY GWPELSISAP GRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	6e-32	Dof family protein