PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152949.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 448aa MW: 47824.8 Da PI: 10.0234

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152949.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.7	8.1e-16	369	425	5	61
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ e+ ++ +++ XP_019152949.1 369 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQTEIMEMQKNMAL 425 79**********************************************999988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MGSNLNFGNE PPGSGGGGRF PGNFGLTRQS SVYSLTFDEF QSSMGGIGKD FGSMNMDELL 60 KNIWSAEENQ TTMGSSSGAQ EGGVPGPGGY LQRQGSLTLP RTLSQKTVDE VWRDMSKVYD 120 IGKDGSAPLG SSNIPQRQPT LGEITLEEFL VRAGVVREEA QLAGKAAAES AALFGDLTHT 180 LNNSGLGFGF QQAGQNTGLM GSRTNESRSV LEIQPASMPL NVNRARSAQP QLGTAHLQQQ 240 PQQKQHQQPL FPKQPVLPYA VPMAIPTTSP LGSNGIRGGT VGASDPAMNG SNAVMNGGFV 300 QSPALHGGRM GMVGLGAGGV SVATGSPAVS SDGFAKSNGD TSSVSPVPFV FNGSLRGRKC 360 SAIEKVVERR QRRMIKNRES AARSRARKQA YTMELEAEVA KLKEENEELQ KKQTEIMEMQ 420 KNMALEMMNN IQQGAKRRCL RRTQTGLW

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MGSNLNFGNE PPGSGGGGRF PGNFGLTRQS SVYSLTFDEF QSSMGGIGKD FGSMNMDELL  60
KNIWSAEENQ TTMGSSSGAQ EGGVPGPGGY LQRQGSLTLP RTLSQKTVDE VWRDMSKVYD  120
IGKDGSAPLG SSNIPQRQPT LGEITLEEFL VRAGVVREEA QLAGKAAAES AALFGDLTHT  180
LNNSGLGFGF QQAGQNTGLM GSRTNESRSV LEIQPASMPL NVNRARSAQP QLGTAHLQQQ  240
PQQKQHQQPL FPKQPVLPYA VPMAIPTTSP LGSNGIRGGT VGASDPAMNG SNAVMNGGFV  300
QSPALHGGRM GMVGLGAGGV SVATGSPAVS SDGFAKSNGD TSSVSPVPFV FNGSLRGRKC  360
SAIEKVVERR QRRMIKNRES AARSRARKQA YTMELEAEVA KLKEENEELQ KKQTEIMEMQ  420
KNMALEMMNN IQQGAKRRCL RRTQTGLW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	3e-89	bZIP family protein