PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152971.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 449aa MW: 49782.8 Da PI: 6.3627

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.5	5.9e-08	112	174	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke +r rr NRe+Ar +R++a eeL++k++ L eN+ Lkke e ke++ lks + XP_019152971.1 112 EKEARRLRRVLANRESARQTIRRRQAMYEELTKKAADLALENENLKKEKELAAKEYDCLKSTN 174 799********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MAYRTTTCRQ YDDGMVDCEL EAAEALAGLA HSALSTASDA SESPANSRSP PPPPPPHEQD 60 HEILSPRHNI ENPLPNILGS GNEFEICPSL TCSFDYPSVI GSKSRQNITE AEKEARRLRR 120 VLANRESARQ TIRRRQAMYE ELTKKAADLA LENENLKKEK ELAAKEYDCL KSTNNSLKAQ 180 VTSVVKEEAQ DIYEVSNSTQ PEMSTAPSFF YNHSPMMPCI WRPMFQPLDA IHLQHGSQNG 240 FSSNVGEPTP FLKQEHSTSN PATPFYVLPF PWLLPFHAPS PYFPQSSDHN ETSVLHQCSV 300 SSSITPVSGV SMEQHRVFLP VKDETEDSNY TQAIQKDDCK EVGLGFLSGL GTNCTTEGIR 360 QHLEPRPKQT AALMAGTKVS SLGGEVCDLN TISSSTLSQI TRDSFEDKGV LTCPSKNSAE 420 ATAAIEARKR RKEIMKLKNH LHCRPCHMH

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MAYRTTTCRQ YDDGMVDCEL EAAEALAGLA HSALSTASDA SESPANSRSP PPPPPPHEQD  60
HEILSPRHNI ENPLPNILGS GNEFEICPSL TCSFDYPSVI GSKSRQNITE AEKEARRLRR  120
VLANRESARQ TIRRRQAMYE ELTKKAADLA LENENLKKEK ELAAKEYDCL KSTNNSLKAQ  180
VTSVVKEEAQ DIYEVSNSTQ PEMSTAPSFF YNHSPMMPCI WRPMFQPLDA IHLQHGSQNG  240
FSSNVGEPTP FLKQEHSTSN PATPFYVLPF PWLLPFHAPS PYFPQSSDHN ETSVLHQCSV  300
SSSITPVSGV SMEQHRVFLP VKDETEDSNY TQAIQKDDCK EVGLGFLSGL GTNCTTEGIR  360
QHLEPRPKQT AALMAGTKVS SLGGEVCDLN TISSSTLSQI TRDSFEDKGV LTCPSKNSAE  420
ATAAIEARKR RKEIMKLKNH LHCRPCHMH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	428	433	RKRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	2e-28	bZIP family protein