PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152978.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 448aa MW: 49654.7 Da PI: 6.3627

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152978.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.5	5.9e-08	111	173	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke +r rr NRe+Ar +R++a eeL++k++ L eN+ Lkke e ke++ lks + XP_019152978.1 111 EKEARRLRRVLANRESARQTIRRRQAMYEELTKKAADLALENENLKKEKELAAKEYDCLKSTN 173 799********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MAYRTTTCRQ YDDGMVDCEL EAAEALAGLA HSALSTASDA SESPANSRSP PPPPPPHEDH 60 EILSPRHNIE NPLPNILGSG NEFEICPSLT CSFDYPSVIG SKSRQNITEA EKEARRLRRV 120 LANRESARQT IRRRQAMYEE LTKKAADLAL ENENLKKEKE LAAKEYDCLK STNNSLKAQV 180 TSVVKEEAQD IYEVSNSTQP EMSTAPSFFY NHSPMMPCIW RPMFQPLDAI HLQHGSQNGF 240 SSNVGEPTPF LKQEHSTSNP ATPFYVLPFP WLLPFHAPSP YFPQSSDHNE TSVLHQCSVS 300 SSITPVSGVS MEQHRVFLPV KDETEDSNYT QAIQKDDCKE VGLGFLSGLG TNCTTEGIRQ 360 HLEPRPKQTA ALMAGTKVSS LGGEVCDLNT ISSSTLSQIT RDSFEDKGVL TCPSKNSAEA 420 TAAIEARKRR KEIMKLKNHL HCRPCHMH

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MAYRTTTCRQ YDDGMVDCEL EAAEALAGLA HSALSTASDA SESPANSRSP PPPPPPHEDH  60
EILSPRHNIE NPLPNILGSG NEFEICPSLT CSFDYPSVIG SKSRQNITEA EKEARRLRRV  120
LANRESARQT IRRRQAMYEE LTKKAADLAL ENENLKKEKE LAAKEYDCLK STNNSLKAQV  180
TSVVKEEAQD IYEVSNSTQP EMSTAPSFFY NHSPMMPCIW RPMFQPLDAI HLQHGSQNGF  240
SSNVGEPTPF LKQEHSTSNP ATPFYVLPFP WLLPFHAPSP YFPQSSDHNE TSVLHQCSVS  300
SSITPVSGVS MEQHRVFLPV KDETEDSNYT QAIQKDDCKE VGLGFLSGLG TNCTTEGIRQ  360
HLEPRPKQTA ALMAGTKVSS LGGEVCDLNT ISSSTLSQIT RDSFEDKGVL TCPSKNSAEA  420
TAAIEARKRR KEIMKLKNHL HCRPCHMH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	427	432	RKRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	1e-28	bZIP family protein