PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152995.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 397aa MW: 44002.4 Da PI: 6.6689

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152995.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.8	4.9e-08	60	122	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke +r rr NRe+Ar +R++a eeL++k++ L eN+ Lkke e ke++ lks + XP_019152995.1 60 EKEARRLRRVLANRESARQTIRRRQAMYEELTKKAADLALENENLKKEKELAAKEYDCLKSTN 122 799********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MAYRTTTCRQ YDDGMVDCEL EAAEALAGLA HSALSTASDA SESPANSRSP PPPPPPHEAE 60 KEARRLRRVL ANRESARQTI RRRQAMYEEL TKKAADLALE NENLKKEKEL AAKEYDCLKS 120 TNNSLKAQVT SVVKEEAQDI YEVSNSTQPE MSTAPSFFYN HSPMMPCIWR PMFQPLDAIH 180 LQHGSQNGFS SNVGEPTPFL KQEHSTSNPA TPFYVLPFPW LLPFHAPSPY FPQSSDHNET 240 SVLHQCSVSS SITPVSGVSM EQHRVFLPVK DETEDSNYTQ AIQKDDCKEV GLGFLSGLGT 300 NCTTEGIRQH LEPRPKQTAA LMAGTKVSSL GGEVCDLNTI SSSTLSQITR DSFEDKGVLT 360 CPSKNSAEAT AAIEARKRRK EIMKLKNHLH CRPCHMH

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MAYRTTTCRQ YDDGMVDCEL EAAEALAGLA HSALSTASDA SESPANSRSP PPPPPPHEAE  60
KEARRLRRVL ANRESARQTI RRRQAMYEEL TKKAADLALE NENLKKEKEL AAKEYDCLKS  120
TNNSLKAQVT SVVKEEAQDI YEVSNSTQPE MSTAPSFFYN HSPMMPCIWR PMFQPLDAIH  180
LQHGSQNGFS SNVGEPTPFL KQEHSTSNPA TPFYVLPFPW LLPFHAPSPY FPQSSDHNET  240
SVLHQCSVSS SITPVSGVSM EQHRVFLPVK DETEDSNYTQ AIQKDDCKEV GLGFLSGLGT  300
NCTTEGIRQH LEPRPKQTAA LMAGTKVSSL GGEVCDLNTI SSSTLSQITR DSFEDKGVLT  360
CPSKNSAEAT AAIEARKRRK EIMKLKNHLH CRPCHMH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	376	381	RKRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	1e-25	bZIP family protein