PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019153079.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 445aa MW: 48063.5 Da PI: 8.9796

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019153079.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45	2.4e-14	360	409	5	54
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r+rr++kNRe+A rsR+RK+a++ eLe + +L++eN +Lk+ l+e+ XP_019153079.1 360 RRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENASLKQALDEMDR 409 79****************************************98888755 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MVVPESEAAS QGEVESPLQL QAEQQQQQKN NEGLSSLGRQ SSIYSLTLDE FQHTLCESGK 60 NFGSMNMDEF LNSIWTAEEN QAHAHAQPHP HPHVGAAAES NAVTHNFMLG QASVPAEKGI 120 ARQQSLARQA SLTLPPPLCR KTVDEVWAEI HKTHQQQQQQ HNSDGKFQNN DPGGNNNNNN 180 NNNTQRQVTF GEMTLEDFLV RAGVVREQGN TAAPPPARPQ QYAAAAMYPN NNTPAAIAPT 240 YVARPVMGLG GGGAVPAYQA LPQGGVVAEA PGYPKRGGGY AQPSPPVYGG RMGNGSAVGY 300 AHMQGLGLGS PVSPVSPDGL CVNPGGDGGN QHYGLDTGIR GGGGGRKRII DGPVEKVVER 360 RQRRMIKNRE SAARSRARKQ AYTVELEAEL NQLKEENASL KQALDEMDRK RKQEAFEEVK 420 PTTPTKAQKA SKKLRLLRRT LSWPS

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MVVPESEAAS QGEVESPLQL QAEQQQQQKN NEGLSSLGRQ SSIYSLTLDE FQHTLCESGK  60
NFGSMNMDEF LNSIWTAEEN QAHAHAQPHP HPHVGAAAES NAVTHNFMLG QASVPAEKGI  120
ARQQSLARQA SLTLPPPLCR KTVDEVWAEI HKTHQQQQQQ HNSDGKFQNN DPGGNNNNNN  180
NNNTQRQVTF GEMTLEDFLV RAGVVREQGN TAAPPPARPQ QYAAAAMYPN NNTPAAIAPT  240
YVARPVMGLG GGGAVPAYQA LPQGGVVAEA PGYPKRGGGY AQPSPPVYGG RMGNGSAVGY  300
AHMQGLGLGS PVSPVSPDGL CVNPGGDGGN QHYGLDTGIR GGGGGRKRII DGPVEKVVER  360
RQRRMIKNRE SAARSRARKQ AYTVELEAEL NQLKEENASL KQALDEMDRK RKQEAFEEVK  420
PTTPTKAQKA SKKLRLLRRT LSWPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36270.1	2e-90	bZIP family protein