PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019153082.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family BES1
Protein Properties Length: 335aa    MW: 36003.3 Da    PI: 9.6302
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019153082.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222106.1e-65321542125
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqs 96 
                     +++rkp+w+ErEnn+rRERrRRaiaakiy+GLRaqGny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+  +e++g+sa+++p+ss + 
  XP_019153082.1  32 SGRRKPSWRERENNRRRERRRRAIAAKIYSGLRAQGNYNLPKHCDNNEVLKALCHEAGWTVEPDGTTYRKGCKPT-PMEIGGTSANITPSSSRNP 125
                     689************************************************************************.******************* PP

          DUF822  97 slkssalaspvesysaspksssfpspssl 125
                     s+ ss++aspv+sy++sp sss psp++ 
  XP_019153082.1 126 SPPSSYFASPVPSYQPSPLSSSCPSPTHH 154
                     **************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MMMWEGGGGS ATSPPAGGGG DGGSGGGGGS ISGRRKPSWR ERENNRRRER RRRAIAAKIY  60
SGLRAQGNYN LPKHCDNNEV LKALCHEAGW TVEPDGTTYR KGCKPTPMEI GGTSANITPS  120
SSRNPSPPSS YFASPVPSYQ PSPLSSSCPS PTHHGGDKMP PHPFAFLRSA IPSSLPPLRI  180
SSSAPVTPPI SSPTRAPKQI FNLETLAKES MSAFNIPFFA SAPTSPTRAH QRFPATIPEC  240
DESDTSTIDS GHWMSFQKYG PNMVPTSPTF NLMKPVNPQR IPSNDAMMLD NNNKGKSVDF  300
GFQNNVAVKA WEGERIHEVG LDDLELTLGS GNTRI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13453RRKPSWRERENNRRRERRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.27e-87BES1 family protein