PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019153284.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Nin-like
Protein Properties Length: 123aa    MW: 14558 Da    PI: 10.7146
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019153284.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK81.39.8e-26249552
          RWP-RK  5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                    +s +++s+yF++pi++AAkeL+v+lT LK++CR +GI+RWPhRk++sl
  XP_019153284.1  2 LSKKTISNYFYMPINQAAKELNVGLTQLKKRCRMLGIRRWPHRKLNSL 49
                    68899*****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MLSKKTISNY FYMPINQAAK ELNVGLTQLK KRCRMLGIRR WPHRKLNSLQ TLINNVQKIG  60
NSEGVVMARE AIELLERENK QVEEIPDVEL EDTTKRLRQA CFKANYKKRR LLEIQQSFLV  120
QQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.13e-46Nin-like family protein