PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019153787.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YA
Protein Properties Length: 276aa    MW: 30767.9 Da    PI: 9.4836
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019153787.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA92.84.1e-29143198258
       CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                      p++VNaKQy++I++RR+ Rak+e e+k+ +  ++pylh SRh hA rRpRg+gGrF
  XP_019153787.1 143 GPIFVNAKQYHGIMRRRKCRAKAEMENKV-KPRKQPYLHLSRHLHATRRPRGCGGRF 198
                     69***************************.99************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MTMQSVFSKE HEGIAQNPMV PWWSVAQPTA YDETLGQLKD ASGNHKQSEG EGALELEQSL  60
SKGIPPQFTV FSGNVTKFPQ VEATISVQPT STEYRGSFEL GFGQSVVYAK NPYSEQCYGV  120
YSAYGPQVAG RIMLPLNLSS DEGPIFVNAK QYHGIMRRRK CRAKAEMENK VKPRKQPYLH  180
LSRHLHATRR PRGCGGRFLN TKDVKGATGS KRKRSEVGSM FDREDPEDHH RPHPINAHLH  240
SSLRASPDMM MNTGHDFLMA GKWMAAAADS CCNLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.21e-47NF-YA family protein