PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019153790.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HB-other
Protein Properties Length: 362aa    MW: 41333 Da    PI: 4.4933
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019153790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.65.6e-10289337553
                     SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
        Homeobox   5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                      +++k+qle+Le ++++++ p+ +++  + + ++L+ ++V  WF  +Ra
  XP_019153790.1 289 KRIKKKQLETLELVYRRSQRPTNAMISSIVHVTNLPHKRVVKWFEDKRA 337
                     5689*******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MAMAASTSLR ISITLQCSRN NAFFVDRPFS RTNLPFPRHR SSSSLLTFAR RRSKPHRPAT  60
TSSNKKKQKR DDEEDEDLDE DAFEALFRQL EEDLKNDKLS LDDDDDDEIT EEDLANLERE  120
LEEALKDDEL SGVFESIVDG EIKNVAEEEE EEEEEEGEVA AAIKGDEDDD DDEEDEDEDE  180
DEKPVRLRNW QLKRLAYALK DGRRKTSIKN LAADVCLDRA VVLELLRDPP PHLVLLSAAL  240
PDKPISTISE PPSIPLETVP LEEATDTAET KTTVEMPVHV MQRNWAAKKR IKKKQLETLE  300
LVYRRSQRPT NAMISSIVHV TNLPHKRVVK WFEDKRAGDG VPDHHIPKLP YRRSAAPEIP  360
PS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.14e-60HB-other family protein