PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019154083.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 338aa MW: 37304.9 Da PI: 8.6939

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019154083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174	4.3e-54	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ XP_019154083.1 16 LPPGFRFHPTDEELVVHYLKKKAASAPLPV-AIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTA 109 79**************************.88***********988899***********************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg+kt+W+mheyrl XP_019154083.1 110 gGTQKVGVKKALVFYGGKPPKGVKTNWIMHEYRL 143 77788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MESTDSSSGS QQQPHLPPGF RFHPTDEELV VHYLKKKAAS APLPVAIIAE VDLYKFDPWE 60 LPAKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPVLTAG GTQKVGVKKA 120 LVFYGGKPPK GVKTNWIMHE YRLADNKPNN KPPGCDINKK GSLRLDDWVL CRIYKKNNTQ 180 RPIDHERDDL NEMLGSIPPS IPTTIQFTHQ KFHQGLFKSA ANYGGLLEND QNIYEGMITS 240 NGSPIVSAAA AANLLPSKHP HHLPAMYWNE DAPTCSDSSP LTKKFLADDS HLTAARTDDQ 300 SGGGGSIATL LSQLPQQNVS GDGVFRQPYP VSGLNWYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-121	NAC family protein