PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019154450.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 312aa    MW: 33800.5 Da    PI: 8.3209
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019154450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.82.9e-14105149347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_019154450.1 105 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 149
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MATRCCTQYG SNGHNSRSCG ESSSVSAASG GSGEIMLFGV RVKVDPMRKS VSLNNLSQYE  60
QPNDDNKNSG NNDSTKAAAD EGYASADDAV PNQSSSGRER KRGVPWTEEE HKLFLLGLQK  120
VGKGDWRGIS RNFVKTRTPT QVASHAQKYF LRRSNLNRRR RRSSLFDITT ESVSPYSMDE  180
GKASQESQVP QVVSPTSLSI SESSQMNAFQ GPPLPVTACP VFVPLQNEKP IENLMLGRGD  240
QVNNASSMFV QQPLSILSVP NASTMIDLNM NQNSTMDPSS LSLRLSLSGD QSQPTHPAFL  300
GFSNGDSVIS VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.22e-55MYB_related family protein