PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019154565.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 213aa MW: 24403.2 Da PI: 7.6801

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019154565.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.1	4.2e-29	147	205	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk++ +pr+YY+C+++gC vkk+ver+ ed k++++ Yeg Hnhe XP_019154565.1 147 LDDGYKWRKYGKKKVKSNSNPRNYYKCSHEGCIVKKRVERDGEDSKFLITEYEGIHNHE 205 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MSNNMNPNFL GPNMMSTTPP SYTNPNLHFP PEMLQDYDYD FDLSYVNTLL NDDHHYSNVV 60 NNNPFASSSS SSSSLFSHPL LPPPTINVQD KSSTTSASSG SSGFDGIMPT TTYPMQEVKS 120 MRQMVNRTKA KERLSIAFRT KTELEILDDG YKWRKYGKKK VKSNSNPRNY YKCSHEGCIV 180 KKRVERDGED SKFLITEYEG IHNHESPYVI YYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	3e-25	WRKY family protein