PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019154602.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 227aa MW: 25773.7 Da PI: 9.1717

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019154602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	96.4	2e-30	31	88	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++cprC+s++tkfCy+nny+++qPry+C++C+r+Wt+GG r++P+Gg + k k+s XP_019154602.1 31 PPRQCPRCHSNDTKFCYFNNYNVNQPRYYCRTCKRHWTHGGIQRDIPIGGRSHKGKRS 88 5689***********************************************9999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MEQGNEVGDY HPPLPPIRRL RTMEYLGSPP PPRQCPRCHS NDTKFCYFNN YNVNQPRYYC 60 RTCKRHWTHG GIQRDIPIGG RSHKGKRSTH RYENKRVQPS PPQLQQSCPQ ANVAPLAFSP 120 LALPPVMTPY RVENGYLNTV NPLRSIEPLH NSSQNIFQPT TRHYGSMTQN FFLNNNDGAS 180 SSNSIPLNAS VDHNTTMADR YTNVGWGSLI ANPNDWLDFS SSFDPSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21050.1	9e-25	Dof family protein