PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019154751.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

ERF

Protein Properties

Length: 806aa MW: 90353.4 Da PI: 6.7141

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019154751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.9	2.1e-17	95	143	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p + r r++lg+f a eAa a+++a+ +++g XP_019154751.1 95 YRGVRQRT-WGKWVAEIREP---N-RgSRIWLGTFTNALEAALAYDEAAIAMYG 143 9**999.******8...3.35*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 806 aa Download sequence
MSSSHTNEKN GMMDACDQVS NGVSSVVDCP EKKRSKKKGD ISKNVAEVLA KWKEHNAKVD 60 SMADGQTTSR KIAAKGSKKG CMKGKGGPEN HRVNYRGVRQ RTWGKWVAEI REPNRGSRIW 120 LGTFTNALEA ALAYDEAAIA MYGTRARLNL PNYSLSRQSL KKSSSSLTEL DSRSASSPSE 180 ATTVVQCSDK GSSSNLGYCD ESQDVTATGE DANNEGHVSE DLRMTAEDQV EYNDKLDIVI 240 SEDKLTNEVP SNESRGLLME DKGINQQLDI FSGTYKAAIA QDEAAKRLHG PCVQLLPNCK 300 LGMKSWTRSS LGSSGSDLTT SNHAEVSTAG NTKKQTSWND AVTVCLQCGD EGFSNSLIHC 360 VQCQHVAIHR YCLDNLPNPV EKFVHWLCED CKAHVPCQFT SQKSGPSMMG KHYAIEKHSN 420 STPAAALNRK RLCNLIAESE KCICKDNLLR SDKTCTKVNL GQAEAMESAS SPLGMKLKNV 480 EQAISTQSEE WRTQNSSSHQ QETHESELTS MDNGSVLTPN EEKCHWVDKS NDVHKQSQLF 540 LARVEDCKQA NYSSCQTYLE MDPSQREDTK LTCGFWPSEK STPLLMVKEH GNFRQPTVAH 600 EETDSVELAL SIGDCSFMNK EMKKTSVCKD KPDQEKNPEE ILLLSCESNL KTKTFTIPEW 660 HGQSQPVTVP IWRGSFNILH NKYDKFDGFV AHLSSKACKK VHDEAHWFQQ IIDFKMFLKS 720 DLLPKTFAIE EPSDDNIGLY FFPESTRYER VFDYLVDEMM RQGLALSAFM KNAELLVFTS 780 MELQPHYRRF HGKHYLWGVF REKQDS

Sequence ? help Back to Top

Protein Sequence Length: 806 aa Download sequence

MSSSHTNEKN GMMDACDQVS NGVSSVVDCP EKKRSKKKGD ISKNVAEVLA KWKEHNAKVD  60
SMADGQTTSR KIAAKGSKKG CMKGKGGPEN HRVNYRGVRQ RTWGKWVAEI REPNRGSRIW  120
LGTFTNALEA ALAYDEAAIA MYGTRARLNL PNYSLSRQSL KKSSSSLTEL DSRSASSPSE  180
ATTVVQCSDK GSSSNLGYCD ESQDVTATGE DANNEGHVSE DLRMTAEDQV EYNDKLDIVI  240
SEDKLTNEVP SNESRGLLME DKGINQQLDI FSGTYKAAIA QDEAAKRLHG PCVQLLPNCK  300
LGMKSWTRSS LGSSGSDLTT SNHAEVSTAG NTKKQTSWND AVTVCLQCGD EGFSNSLIHC  360
VQCQHVAIHR YCLDNLPNPV EKFVHWLCED CKAHVPCQFT SQKSGPSMMG KHYAIEKHSN  420
STPAAALNRK RLCNLIAESE KCICKDNLLR SDKTCTKVNL GQAEAMESAS SPLGMKLKNV  480
EQAISTQSEE WRTQNSSSHQ QETHESELTS MDNGSVLTPN EEKCHWVDKS NDVHKQSQLF  540
LARVEDCKQA NYSSCQTYLE MDPSQREDTK LTCGFWPSEK STPLLMVKEH GNFRQPTVAH  600
EETDSVELAL SIGDCSFMNK EMKKTSVCKD KPDQEKNPEE ILLLSCESNL KTKTFTIPEW  660
HGQSQPVTVP IWRGSFNILH NKYDKFDGFV AHLSSKACKK VHDEAHWFQQ IIDFKMFLKS  720
DLLPKTFAIE EPSDDNIGLY FFPESTRYER VFDYLVDEMM RQGLALSAFM KNAELLVFTS  780
MELQPHYRRF HGKHYLWGVF REKQDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05410.2	1e-26	ERF family protein