PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019154752.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

ERF

Protein Properties

Length: 804aa MW: 90097.1 Da PI: 6.6531

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019154752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.9	2.1e-17	95	143	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p + r r++lg+f a eAa a+++a+ +++g XP_019154752.1 95 YRGVRQRT-WGKWVAEIREP---N-RgSRIWLGTFTNALEAALAYDEAAIAMYG 143 9**999.******8...3.35*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MSSSHTNEKN GMMDACDQVS NGVSSVVDCP EKKRSKKKGD ISKNVAEVLA KWKEHNAKVD 60 SMADGQTTSR KIAAKGSKKG CMKGKGGPEN HRVNYRGVRQ RTWGKWVAEI REPNRGSRIW 120 LGTFTNALEA ALAYDEAAIA MYGTRARLNL PNYSLSRQSL KKSSSSLTEL DSRSASSPSE 180 ATTVVQCSDK GSSSNLGYCD ESQDVTATGE DANNEGHVSE DLRMTAEDQV EYNDKLDIVI 240 SEDKLTNEVP SNESRGLLME DKGINQQLDI FSGTYKAAIA QDEAAKRLHG PCVQLLPNCK 300 LGMKSWTRSS LGSSGSDLTT SNHAEVSTAG NTKTSWNDAV TVCLQCGDEG FSNSLIHCVQ 360 CQHVAIHRYC LDNLPNPVEK FVHWLCEDCK AHVPCQFTSQ KSGPSMMGKH YAIEKHSNST 420 PAAALNRKRL CNLIAESEKC ICKDNLLRSD KTCTKVNLGQ AEAMESASSP LGMKLKNVEQ 480 AISTQSEEWR TQNSSSHQQE THESELTSMD NGSVLTPNEE KCHWVDKSND VHKQSQLFLA 540 RVEDCKQANY SSCQTYLEMD PSQREDTKLT CGFWPSEKST PLLMVKEHGN FRQPTVAHEE 600 TDSVELALSI GDCSFMNKEM KKTSVCKDKP DQEKNPEEIL LLSCESNLKT KTFTIPEWHG 660 QSQPVTVPIW RGSFNILHNK YDKFDGFVAH LSSKACKKVH DEAHWFQQII DFKMFLKSDL 720 LPKTFAIEEP SDDNIGLYFF PESTRYERVF DYLVDEMMRQ GLALSAFMKN AELLVFTSME 780 LQPHYRRFHG KHYLWGVFRE KQDS

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MSSSHTNEKN GMMDACDQVS NGVSSVVDCP EKKRSKKKGD ISKNVAEVLA KWKEHNAKVD  60
SMADGQTTSR KIAAKGSKKG CMKGKGGPEN HRVNYRGVRQ RTWGKWVAEI REPNRGSRIW  120
LGTFTNALEA ALAYDEAAIA MYGTRARLNL PNYSLSRQSL KKSSSSLTEL DSRSASSPSE  180
ATTVVQCSDK GSSSNLGYCD ESQDVTATGE DANNEGHVSE DLRMTAEDQV EYNDKLDIVI  240
SEDKLTNEVP SNESRGLLME DKGINQQLDI FSGTYKAAIA QDEAAKRLHG PCVQLLPNCK  300
LGMKSWTRSS LGSSGSDLTT SNHAEVSTAG NTKTSWNDAV TVCLQCGDEG FSNSLIHCVQ  360
CQHVAIHRYC LDNLPNPVEK FVHWLCEDCK AHVPCQFTSQ KSGPSMMGKH YAIEKHSNST  420
PAAALNRKRL CNLIAESEKC ICKDNLLRSD KTCTKVNLGQ AEAMESASSP LGMKLKNVEQ  480
AISTQSEEWR TQNSSSHQQE THESELTSMD NGSVLTPNEE KCHWVDKSND VHKQSQLFLA  540
RVEDCKQANY SSCQTYLEMD PSQREDTKLT CGFWPSEKST PLLMVKEHGN FRQPTVAHEE  600
TDSVELALSI GDCSFMNKEM KKTSVCKDKP DQEKNPEEIL LLSCESNLKT KTFTIPEWHG  660
QSQPVTVPIW RGSFNILHNK YDKFDGFVAH LSSKACKKVH DEAHWFQQII DFKMFLKSDL  720
LPKTFAIEEP SDDNIGLYFF PESTRYERVF DYLVDEMMRQ GLALSAFMKN AELLVFTSME  780
LQPHYRRFHG KHYLWGVFRE KQDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05410.2	1e-26	ERF family protein