PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019154753.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

ERF

Protein Properties

Length: 798aa MW: 89422.5 Da PI: 6.714

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019154753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.9	2.1e-17	95	143	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p + r r++lg+f a eAa a+++a+ +++g XP_019154753.1 95 YRGVRQRT-WGKWVAEIREP---N-RgSRIWLGTFTNALEAALAYDEAAIAMYG 143 9**999.******8...3.35*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MSSSHTNEKN GMMDACDQVS NGVSSVVDCP EKKRSKKKGD ISKNVAEVLA KWKEHNAKVD 60 SMADGQTTSR KIAAKGSKKG CMKGKGGPEN HRVNYRGVRQ RTWGKWVAEI REPNRGSRIW 120 LGTFTNALEA ALAYDEAAIA MYGTRARLNL PNYSLSRQSL KKSSSSLTEL DSRSASSPSE 180 ATTVVQCSDK GSSSNLGYCD ESQDVTATGE DANNEGHVSE DLRMTAEDQV EYNDKLDIVI 240 SEDKLTNEVP SNESRGLLME DKGINQQLDI FSGTYKAAIA QDEAAKRLHG PCVQLLPNCK 300 LGMKSWTRSS LGSSGSDLTT SNHAEVSTAG NTKVTVCLQC GDEGFSNSLI HCVQCQHVAI 360 HRYCLDNLPN PVEKFVHWLC EDCKAHVPCQ FTSQKSGPSM MGKHYAIEKH SNSTPAAALN 420 RKRLCNLIAE SEKCICKDNL LRSDKTCTKV NLGQAEAMES ASSPLGMKLK NVEQAISTQS 480 EEWRTQNSSS HQQETHESEL TSMDNGSVLT PNEEKCHWVD KSNDVHKQSQ LFLARVEDCK 540 QANYSSCQTY LEMDPSQRED TKLTCGFWPS EKSTPLLMVK EHGNFRQPTV AHEETDSVEL 600 ALSIGDCSFM NKEMKKTSVC KDKPDQEKNP EEILLLSCES NLKTKTFTIP EWHGQSQPVT 660 VPIWRGSFNI LHNKYDKFDG FVAHLSSKAC KKVHDEAHWF QQIIDFKMFL KSDLLPKTFA 720 IEEPSDDNIG LYFFPESTRY ERVFDYLVDE MMRQGLALSA FMKNAELLVF TSMELQPHYR 780 RFHGKHYLWG VFREKQDS

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MSSSHTNEKN GMMDACDQVS NGVSSVVDCP EKKRSKKKGD ISKNVAEVLA KWKEHNAKVD  60
SMADGQTTSR KIAAKGSKKG CMKGKGGPEN HRVNYRGVRQ RTWGKWVAEI REPNRGSRIW  120
LGTFTNALEA ALAYDEAAIA MYGTRARLNL PNYSLSRQSL KKSSSSLTEL DSRSASSPSE  180
ATTVVQCSDK GSSSNLGYCD ESQDVTATGE DANNEGHVSE DLRMTAEDQV EYNDKLDIVI  240
SEDKLTNEVP SNESRGLLME DKGINQQLDI FSGTYKAAIA QDEAAKRLHG PCVQLLPNCK  300
LGMKSWTRSS LGSSGSDLTT SNHAEVSTAG NTKVTVCLQC GDEGFSNSLI HCVQCQHVAI  360
HRYCLDNLPN PVEKFVHWLC EDCKAHVPCQ FTSQKSGPSM MGKHYAIEKH SNSTPAAALN  420
RKRLCNLIAE SEKCICKDNL LRSDKTCTKV NLGQAEAMES ASSPLGMKLK NVEQAISTQS  480
EEWRTQNSSS HQQETHESEL TSMDNGSVLT PNEEKCHWVD KSNDVHKQSQ LFLARVEDCK  540
QANYSSCQTY LEMDPSQRED TKLTCGFWPS EKSTPLLMVK EHGNFRQPTV AHEETDSVEL  600
ALSIGDCSFM NKEMKKTSVC KDKPDQEKNP EEILLLSCES NLKTKTFTIP EWHGQSQPVT  660
VPIWRGSFNI LHNKYDKFDG FVAHLSSKAC KKVHDEAHWF QQIIDFKMFL KSDLLPKTFA  720
IEEPSDDNIG LYFFPESTRY ERVFDYLVDE MMRQGLALSA FMKNAELLVF TSMELQPHYR  780
RFHGKHYLWG VFREKQDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05410.2	1e-26	ERF family protein