PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019154774.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 294aa    MW: 31922.1 Da    PI: 5.0013
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019154774.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.40.00098267290123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     + C+ C+++F +   L +H +  H
  XP_019154774.1 267 HACKSCNRTFGSEGALDSHTKAkH 290
                     67*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MEFWGVEVKS GEPLSVKPGD GMILHLSQAN VGEVKKLHGS ESVCLFVNVD GKKLVLGTLI  60
SDKLPQQQFD LIFDKDFELS HNWKNGNVYF YGFKAQNPVA DDDDDQESDS DEDSPLTFKA  120
EPETVVKPEK QAGSEKSDVA KSSAPDKKVK IKEPHKDAKA KEDESSDEDM GSDDDDLSDE  180
DMDSSDGEDE DESDETPKKV ESGKKRLAES AKKTPASDKN KKAKMETPQK TGGKKSSVHV  240
ATPYPSKQAK TAANKPNQST PKSAGSHACK SCNRTFGSEG ALDSHTKAKH SSGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.25e-33C2H2 family protein