PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019154856.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 349aa    MW: 37154.3 Da    PI: 8.4258
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019154856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer112.22.7e-3567124359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                      v+YkeClkNhAas+GghavDGCgEfmps++++ +++++lkCaACgCHRnFHRre+ee
  XP_019154856.1  67 VVVYKECLKNHAASIGGHAVDGCGEFMPSPTANpADPTSLKCAACGCHRNFHRREPEE 124
                     589******************************9********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MDLGSNPPAA TNASSAAAAA VKGGDVQESE TPAARISAVK PLSFSSNGVL KRHNSLHHHH  60
HHHHAVVVVY KECLKNHAAS IGGHAVDGCG EFMPSPTANP ADPTSLKCAA CGCHRNFHRR  120
EPEEPLGLPS AAPALEYQPH HRHHPPPPPP PPPHDHSSPN SPSPPPISSS YYPSAPQMLL  180
ALSTGLSGHP AADITTPISA AANPSSIHPS PHMKGRKRFR TKFTQDQKGK MLDFAERIGW  240
KIQKRDEELI NDFCREIGVE RGVLKVWMHN NKNTVGKRDN ITTTPAAAAA ADNGNAHSLG  300
FDIGRVNSAP LTSDFNLRPE SNNNGSHSQN HYALHSGDVL AANGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.15e-64ZF-HD family protein