PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019155111.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 261aa    MW: 29242.4 Da    PI: 7.9219
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019155111.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM143.61.1e-4471381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                     lppG+rF Pt+eelv++yL++k++g + e+++vi+ v+iy+++PwdLp+      +++ ++w+fF++r+ ++a+g r++r t++gyWkatg+   
  XP_019155111.1   7 LPPGYRFYPTEEELVSFYLRNKLQGARQEIHTVIPVVNIYDFNPWDLPQlagqYSRSDPEQWFFFIPRQDREARGGRPTRLTAEGYWKATGSPGC 101
                     79****************************999**************9655643344666*********************************** PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     v+s +++ vg k+t+vfy+grap+g+kt+W m+eyr+
  XP_019155111.1 102 VYSVNNRIVGGKRTMVFYRGRAPSGRKTEWKMNEYRA 138
                     ***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MSAESDLPPG YRFYPTEEEL VSFYLRNKLQ GARQEIHTVI PVVNIYDFNP WDLPQLAGQY  60
SRSDPEQWFF FIPRQDREAR GGRPTRLTAE GYWKATGSPG CVYSVNNRIV GGKRTMVFYR  120
GRAPSGRKTE WKMNEYRAIE EEASASSITN SANLKLHQEF SLCRAYKRAK CVRAFDRRPT  180
SSSPAITAAA FQPSPPQAAY YNQAASTSQQ NTAPPLPPPA GDYQRSSSSS GGDPDGGLDF  240
PPYGFSWDEF DELHCLLGNA Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.19e-74NAC family protein