PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019155265.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NF-YB

Protein Properties

Length: 167aa MW: 18478.7 Da PI: 8.4239

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019155265.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	104.1	1e-32	26	115	5	94
NF-YB 5 drflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 ++ +P++ + +im++++ +n +i++daketvq+cv+efi +vt++a+++++ ekrkt+++ddllwa+ lG+ +y+e l+ ++ yre + XP_019155265.1 26 QNDIPLSSILKIMRRAIHGNMRIADDAKETVQKCVTEFIHYVTAKANERSRLEKRKTVTADDLLWAMRALGLGNYAEVLTDFIIGYREQQ 115 5679***********************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MPAGGTNANM NDNTAAATQQ RRRAPQNDIP LSSILKIMRR AIHGNMRIAD DAKETVQKCV 60 TEFIHYVTAK ANERSRLEKR KTVTADDLLW AMRALGLGNY AEVLTDFIIG YREQQEYGRA 120 ATHHVPSYAV PEFSPGPMND AGGSASSSFP YRGDYIIDPS YPPNFNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	1e-30	NF-YB family protein