PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019155540.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 178aa    MW: 19142.4 Da    PI: 5.0583
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019155540.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.6e-191766255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ykGVr++k +g+Wv+eIr+p   g ++r++lg+++t+e+Aa+a++ a+  ++g
  XP_019155540.1 17 VYKGVRRRK-WGKWVSEIREP---GTKTRIWLGSYDTPEMAAAAYDVAAFHFKG 66
                    59****998.**********8...325*********************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MEEPCNSAAG HSPAGGVYKG VRRRKWGKWV SEIREPGTKT RIWLGSYDTP EMAAAAYDVA  60
AFHFKGFAGV RLNFPDLVEG FPKPASSRAE DVRLAAQEAA MRFKRPPATA AAETPSGSGG  120
QAAAGLSSVR VGLSKSQIEA INETPMDSPS AIWMELGTSI EDLEGDWVEM HTDSIWDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11925KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.16e-40ERF family protein