PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019155541.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 166aa    MW: 17991.1 Da    PI: 6.2655
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019155541.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.3e-171260254
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54
                    +y+GVr++k +g+Wv+eIr+p   g +  r +lg++ t+e Aa a++ a  +l+
  XP_019155541.1 12 RYRGVRRRK-WGKWVSEIRVP---G-TqDRLWLGTYATPEAAAVAHDIASVCLR 60
                    7*****998.**********8...3.35********************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MSSAGGEESQ RRYRGVRRRK WGKWVSEIRV PGTQDRLWLG TYATPEAAAV AHDIASVCLR  60
ETASLDKLNF PTLMPPAGVG RGMSPRSVQK VASDAGMAVD AQQHLLLHPP QAVEFSGGGE  120
NRWGGGEAAE EVFRWAERPC CSSSREGSGI SEEAQALSIS VDDYLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.18e-29ERF family protein