PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019155721.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 205aa MW: 22513.3 Da PI: 8.4781

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019155721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	139.2	2.6e-43	7	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 l pGf FhPtdeel+v+yL++kv +++l++ vi e+ ++++++Pw+Lp ++ e yfFs+r+ k +g+r +r t sgyWkatg+dk++ + XP_019155721.1 7 LLPGFCFHPTDEELIVHYLNPKVLNSPLPA-AVILEIdNVCQSDPWNLP-G--VSDGERYFFSSREVKDGSGNRCSRGTLSGYWKATGNDKKIAA 97 579*************************.77888868******.3..367899*******************************9 PP NAM 95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++vg++ktL+fykg+ ++++ktdW+mheyrl XP_019155721.1 98 SgeAQRVVGIRKTLAFYKGKPSNSSKTDWIMHEYRL 133 9666667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MDNLSMLLPG FCFHPTDEEL IVHYLNPKVL NSPLPAAVIL EIDNVCQSDP WNLPGVSDGE 60 RYFFSSREVK DGSGNRCSRG TLSGYWKATG NDKKIAASGE AQRVVGIRKT LAFYKGKPSN 120 SSKTDWIMHE YRLADAPQAN LVLCRIFFKK RGNSSRAASL IPAFRDFFAA ERADLNLAPA 180 SSSSSRSSPV SDHQEATSCS SFKGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-60	NAC family protein