PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019155863.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WOX

Protein Properties

Length: 219aa MW: 24769.1 Da PI: 9.2855

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019155863.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.7	1.5e-21	82	141	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ XP_019155863.1 82 TRWNPTQEQIGILEMLYRGgMRTPNAQQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 141 7***************99************************************97 PP
2	Wus_type_Homeobox	118.5	2.9e-38	82	143	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly+ G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq XP_019155863.1 82 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 143 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MKVHQFTRGF IFEQDQVPSL SLGCKRFRPL APKLGGGDAA TAAISVTPPA FDLKSFIKPE 60 SSPRSPDEKK DSPQAETHPG GTRWNPTQEQ IGILEMLYRG GMRTPNAQQI EQITAQLGKY 120 GKIEGKNVFY WFQNHKARER QKQKRNSLGL NHSPRTPPPP PITTVSSLTF DPWGEDIACK 180 RKCRPWAFEC LEEEKRWACS REEGDGTLEL FPLHPELGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	6e-74	WOX family protein