PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019155906.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 326aa    MW: 36950.1 Da    PI: 6.6862
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019155906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.7e-19236286255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta +Aaka+++a+ +l+g
  XP_019155906.1 236 HYRGVRRRP-WGKFAAEIRDPKRRG--SRVWLGTFDTAIDAAKAYDRAAFRLRG 286
                     7********.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MATLDEVLTL ERIRNHLLGE FTQRECNLAN ELSNSCSANS SGTEVSSSQS ESYYSSPLTI  60
SDHNFIYGNI DDISMDFPTD YFDFEGNLLE LEPISSVSRF SSLSFEQIEG DIDVLRPESQ  120
SSISSSACMS FEHSDTKIFK FEATNCNQII DLTSPEARNS KFQASFEARD SNFQASFEAR  180
NSNVQASFEA RDSNFQASLR KERKPSMSID VPAKKKFEWI VFGSSSPVRE KSERRHYRGV  240
RRRPWGKFAA EIRDPKRRGS RVWLGTFDTA IDAAKAYDRA AFRLRGRKAI LNFPSEIAKH  300
KLQMATQAAM DGGMKQRREA EVVKNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.18e-35ERF family protein