PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019155923.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 130aa    MW: 15339.5 Da    PI: 4.473
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019155923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.82.5e-1537993195
                    .--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3 31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                      +++++l+++  ++W+v +  +k +++ ++++GW +Fv +n +k+gD +vF++dg   fe +v 
  XP_019155923.1 37 VIPTEVILRNRLMNTWRVGI--TKIGESLYFKNGWANFVADNSIKTGDYMVFRFDGYGPFEVLVL 99
                    46789***************..********************************99999877765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MEHGNAKFYM PFRPETCSEK LEIPKWFKWL WGDFVDVIPT EVILRNRLMN TWRVGITKIG  60
ESLYFKNGWA NFVADNSIKT GDYMVFRFDG YGPFEVLVLG VDDLTDWDKA IIRMDEEDEE  120
TQTQGERKTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06160.12e-15B3 family protein