PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019155936.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

SRS

Protein Properties

Length: 334aa MW: 35435.9 Da PI: 8.3449

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019155936.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	218.3	1.6e-67	118	268	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa....aeaaskrkrelkskkqsalsstklss 93 sg+++CqdCGnqakkdC+h RCRtCCksrgf+C+thvkstWv+aakrrerqqq++ s ++ +++ +++++kr+r +++s l++t++++ XP_019155936.1 118 SGGVNCQDCGNQAKKDCTHLRCRTCCKSRGFQCQTHVKSTWVSAAKRRERQQQQQLFSLQQHQTQplsfRAENPKRQR----DSSSPLACTRITT 208 7899********************************************9998877777766664444444444444....5688899999999 PP DUF702 94 aeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++s e+ + +P+ev+s+avfrcv+vs++dd+ +++aYqtavsigGhvfkGiLydqG+e+ XP_019155936.1 209 TSSGLEVGGH-FPAEVNSPAVFRCVKVSAMDDEVDQYAYQTAVSIGGHVFKGILYDQGAET 268 9888777665.*********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
GSGKDQDHHH PELGGGNSNS NLFLFKNEEI YNKGFELWQQ YYHMHHHHQQ RGVQQHQLVD 60 FSVGVGPSRN AGHGGGGGGG SSSSSGGNLV GSDDQNPGPS FRVLRQGGGG GGGGGSSSGG 120 VNCQDCGNQA KKDCTHLRCR TCCKSRGFQC QTHVKSTWVS AAKRRERQQQ QQLFSLQQHQ 180 TQPLSFRAEN PKRQRDSSSP LACTRITTTS SGLEVGGHFP AEVNSPAVFR CVKVSAMDDE 240 VDQYAYQTAV SIGGHVFKGI LYDQGAETRY PSAGGGHEGS SGSGAAQQPL NLISGAATSH 300 QQAAAVATMI DPSLYPTPLS AFMAGTQFFP PPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	1e-66	SRS family protein