PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019156008.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 170aa    MW: 18684.3 Da    PI: 10.071
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019156008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.40.001728223
                    EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                    kC+ C k F +   L  H+r+H
  XP_019156008.1  7 KCKLCWKEFANGKALGGHMRSH 28
                    7********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MAMEKQKCKL CWKEFANGKA LGGHMRSHFA PLPMTPPQKQ DSGGVDPTGK PAQGRSKRAR  60
RLFVSEENEE SADQGAKNEE EMGKTAKLEE NIAMCLLMLS DDVRGDSGTM KRRKKSKDKE  120
NFRCEICNGV FKCSQALGSH RTAHRNKTVN AGAGAGEKLR NLGVKNSETS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02030.16e-26C2H2 family protein