PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019156035.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 232aa    MW: 25486.3 Da    PI: 5.3834
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019156035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-1858107255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr ++ +grWv+eIr+p++   + r++lg+f tae+Aa+a++ a+ +++g
  XP_019156035.1  58 IYRGVRKRS-WGRWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAAIAIKG 107
                     69****888.**********843...6**********************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MLSYTSPFTL LSSMEESDDH IPTNKYQATT TAVSPPSNSS NAAAEKKKKK NDDGKHPIYR  60
GVRKRSWGRW VSEIREPRKK SRIWLGTFAT AEMAARAHDV AAIAIKGSSA VLNFPELAAK  120
LPRPASKSAK DVQAAAAKAA ALDYPPEPPT PSQAEPESEP FSPEETATSE SSSESPSSFN  180
EDPFLDLPDL LFNPAHRAAA EFGYTSPWLQ LAGFEPFHAD IWSEENFLWN YS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.17e-31ERF family protein