PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019156037.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 237aa    MW: 26120.6 Da    PI: 6.7688
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019156037.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.5e-1865115155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+Wv+e+r+p     + kr+++g++ t+e+Aa+a++ a+++l+g
  XP_019156037.1  65 PVYRGVRRRG-NGKWVCELREPI----NqKRIWVGSYPTPEMAARAHDVAALALRG 115
                     68*****999.8*********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MNESACSSVG FRFRESGQLP PATSSVSGGS CSSSNCMAAH SDEDVLARKP KRPAGRKKFK  60
ETRHPVYRGV RRRGNGKWVC ELREPINQKR IWVGSYPTPE MAARAHDVAA LALRGQFATL  120
NFADSVWRLP VPVSKDAKDI RRAAVMAAEG FRETTTTTAV AKVVEEEVES KLMRIDVSNI  180
DEEEMGVDGM IEKMAEAVLY SPACMQLGNI NAFTTWDQAD QLGSDDVVEV SLWSYSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15260RPAGRKKFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63030.24e-37ERF family protein