PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019156063.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 195aa    MW: 20912.2 Da    PI: 6.3531
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019156063.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.93.9e-163380355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+G+r  ++ g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+g
  XP_019156063.1 33 YRGIR--SRGGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALALRG 80
                    89995..679*********843...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MADRYSQSLH HPAADSVPSP SRATSAGKHP IMYRGIRSRG GKWVSEIREP RKTTRIWLGT  60
YPTPEMAAAA YDVAALALRG SEAVLNFPAH ASRYPVPATS SPADIRSAAT SGAAMFQVQS  120
SGDQPAGTAS SRQLRNDAQP PPAGEYIDEE ALFDMPNLLV DMAGGMMVSP PRINPVSSDD  180
SPSWNSDAES HLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-49ERF family protein