PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019156068.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 145aa    MW: 16467.2 Da    PI: 10.3557
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019156068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.3e-114189355
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     +h+ +Er RR++i +++  L+el+P +    +k   Ka +L k ++Y++sLq
  XP_019156068.1 41 NSHSLAERVRREKISERMRLLQELVPGC----NKIAGKAVMLDKIIKYVQSLQ 89
                    58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MGDVLECSKE QGKKKHKTRQ NDSARKENYV HVRAKRGQAT NSHSLAERVR REKISERMRL  60
LQELVPGCNK IAGKAVMLDK IIKYVQSLQQ QVEFLSMKLA TVNPEMNLDV EQILPKDIFL  120
PGLNIPHRSF TCIPGSTPLH ALPQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-57bHLH family protein