PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019156077.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 185aa    MW: 21099.8 Da    PI: 4.9797
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019156077.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.7e-2093143255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr ++ +g+++AeIrdp +ng  kr +lg++gtaeeAa a+++a+ +l+g
  XP_019156077.1  93 RYRGVRMRP-WGKFAAEIRDPAKNG--KRRWLGTYGTAEEAALAYDRAAFCLRG 143
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MAAYETDEII TPDYDVLEFI RQHLLNDFED YPVTPPELFF LSDNCVELAM PENVSVAPEM  60
DFPEWTEVLN FPPVAADQPE KEVAAAEPPT GKRYRGVRMR PWGKFAAEIR DPAKNGKRRW  120
LGTYGTAEEA ALAYDRAAFC LRGTRALLNF PWRINSGEPA PVRITSRKRR SASSETHDDP  180
VKRRN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166171SRKRRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.12e-33ERF family protein