PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019156132.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 445aa MW: 48708.6 Da PI: 6.68

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019156132.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.3	8.8e-10	305	364	5	64
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 +r +r NR +A rs +RK +i eLe kv++L++e ++L +++ ++k + l s+++ XP_019156132.1 305 RRVKRILANRQSAARSKERKVRYISELELKVQTLQSEATTLSAQVNIMQKDLDDLSSHNH 364 67899999****************************************999999999885 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MAQSNSKPPI GQNFGFGASH ARSLSQPHFF ANNCLPPMPP ANSGMKDVQM DEVEVNPRGT 60 PIASVVKENV FRGSDSLPPR KGHRRSNSDV PMGFSAMIQS SPQLMPISGH GVFGKSEYGG 120 DFLGREKPIC LQKREIDVSG DMKLEGEVID ELFSSYMNLD NMERFNTSGT DDKDKDSMVS 180 GTKMSGGDSG NEVESVSKGK GAQIHITGSR EGVKRCAAGD IAPTSRHCRS LSMDSALENL 240 NFGDESPKLP ASLGNWVGQL SPSNSGYESS SKLNFDVGNA EFNEAEMKKI MADERLAEIA 300 TSDPRRVKRI LANRQSAARS KERKVRYISE LELKVQTLQS EATTLSAQVN IMQKDLDDLS 360 SHNHELKFRL QAMEQQAQLR DALHEALTAE VQRLKVATGE LSDECRLSSS CVPQEILQRH 420 MSQMQRQQPG QGPQLSMATS RTAST

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MAQSNSKPPI GQNFGFGASH ARSLSQPHFF ANNCLPPMPP ANSGMKDVQM DEVEVNPRGT  60
PIASVVKENV FRGSDSLPPR KGHRRSNSDV PMGFSAMIQS SPQLMPISGH GVFGKSEYGG  120
DFLGREKPIC LQKREIDVSG DMKLEGEVID ELFSSYMNLD NMERFNTSGT DDKDKDSMVS  180
GTKMSGGDSG NEVESVSKGK GAQIHITGSR EGVKRCAAGD IAPTSRHCRS LSMDSALENL  240
NFGDESPKLP ASLGNWVGQL SPSNSGYESS SKLNFDVGNA EFNEAEMKKI MADERLAEIA  300
TSDPRRVKRI LANRQSAARS KERKVRYISE LELKVQTLQS EATTLSAQVN IMQKDLDDLS  360
SHNHELKFRL QAMEQQAQLR DALHEALTAE VQRLKVATGE LSDECRLSSS CVPQEILQRH  420
MSQMQRQQPG QGPQLSMATS RTAST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-108	bZIP family protein